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SRX006183: 454 whole genome shotgun sequencing of genomic DNA paired-end library '454-2894' containing sample 'Acidaminococcus sp. D21'
2 LS454 (454 GS FLX) runs: 54,771 spots, 16.1M bases, 30.8Mb downloads

UUID: 92196dbb-4c9b-41f6-ba08-bdfeccdbb5c3
Design: 15X fragment; 30X physical paired
Submitted by: Broad Institute (BI)
Study: Reference genome for the Human Microbiome Project
PRJNA34117 • SRP001647 • All experiments • All runs
show Abstracthide Abstract
<b><i>Acidaminococcus</i> sp. D21</b>. This strain was isolated from the human gastrointestinal tract. It will be sequenced for comparative genome analysis.
Sample: Generic sample from Acidaminococcus sp. D21
SAMN00102964 • SRS002798 • All experiments • All runs
Organism: Acidaminococcus intestini
Library:
Name: 454-2894
Instrument: 454 GS FLX
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
          barcode
Group tagBasecalls
AGACAC
11  forward           reverse

Experiment attributes: (show all 5 attributes...) (hide...)
gssr_id: 33052.1
lsid: BROAD:SEQUENCING_SAMPLE:33052.1
material_type: Genomic DNA
project: G1745
work_request: 19280
Pipeline: show...hide...
NameStepProgramVersion
base caller2009-06-30 10:15:09.0454BaseCaller2.0.00.22
Runs: 2 runs, 54,771 spots, 16.1M bases, 30.8Mb
Run# of Spots# of BasesSizePublished
SRR01833926,2967.7M14.8Mb2009-07-13
SRR01834028,4758.4M16Mb2012-07-09

ID:
6442

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